High resolution helical reconstruction of the bacterial p-type ATPase copper transporter CopA
Organism: Archaeoglobus fulgidus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3J08
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 16
Sequence positions:
A: 105-121|129-144|164-180|189-204|338-356|368-387|671-692|702-726
B: 102-121|129-142|166-181|189-204|334-351|371-388|669-687|703-729
Tilt angles:
A - Segment: 105-121 - Tilt: 40.3°
A - Segment: 129-144 - Tilt: 26.7°
A - Segment: 164-180 - Tilt: 19.4°
A - Segment: 189-204 - Tilt: 20.1°
A - Segment: 338-356 - Tilt: 32.0°
A - Segment: 368-387 - Tilt: 48.2°
A - Segment: 671-692 - Tilt: 39.6°
A - Segment: 702-726 - Tilt: 46.7°
B - Segment: 102-121 - Tilt: 30.1°
B - Segment: 129-142 - Tilt: 14.1°
B - Segment: 166-181 - Tilt: 20.7°
B - Segment: 189-204 - Tilt: 23.6°
B - Segment: 334-351 - Tilt: 36.6°
B - Segment: 371-388 - Tilt: 37.0°
B - Segment: 669-687 - Tilt: 34.0°
B - Segment: 703-729 - Tilt: 57.2°
Structural assessment:
MAIDEN score = -98.7220
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]