High resolution helical reconstruction of the bacterial p-type ATPase copper transporter CopA
Organism: Archaeoglobus fulgidus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3J08
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.0 Å
Number of TM segments = 16
Sequence positions:
A: 12-31|34-51|72-90|94-111|242-265|274-296|578-602|608-636
B: 655-675|680-696|717-735|740-757|887-909|920-941|1223-1247|1253-1281
Tilt angles:
A - Segment: 12-31 - Tilt: 29.5°
A - Segment: 34-51 - Tilt: 25.5°
A - Segment: 72-90 - Tilt: 18.9°
A - Segment: 94-111 - Tilt: 11.4°
A - Segment: 242-265 - Tilt: 22.3°
A - Segment: 274-296 - Tilt: 41.5°
A - Segment: 578-602 - Tilt: 40.2°
A - Segment: 608-636 - Tilt: 46.6°
B - Segment: 655-675 - Tilt: 23.8°
B - Segment: 680-696 - Tilt: 20.9°
B - Segment: 717-735 - Tilt: 15.9°
B - Segment: 740-757 - Tilt: 18.3°
B - Segment: 887-909 - Tilt: 24.0°
B - Segment: 920-941 - Tilt: 35.9°
B - Segment: 1223-1247 - Tilt: 36.9°
B - Segment: 1253-1281 - Tilt: 43.7°
Structural assessment:
MAIDEN score = -139.7518
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]