High resolution helical reconstruction of the bacterial p-type ATPase copper transporter CopA
Organism: Archaeoglobus fulgidus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3J09
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.3 Å
Number of TM segments = 14
Sequence positions:
A: 87-107|116-134|150-166|168-189|322-339|354-370|661-678|686-704
B: 814-831|838-853|1047-1066|1076-1093|1386-1403|1409-1427
Tilt angles:
A - Segment: 87-107 - Tilt: 16.2°
A - Segment: 116-134 - Tilt: 17.5°
A - Segment: 150-166 - Tilt: 9.2°
A - Segment: 168-189 - Tilt: 26.8°
A - Segment: 322-339 - Tilt: 4.8°
A - Segment: 354-370 - Tilt: 18.0°
A - Segment: 661-678 - Tilt: 11.5°
A - Segment: 686-704 - Tilt: 18.0°
B - Segment: 814-831 - Tilt: 22.9°
B - Segment: 838-853 - Tilt: 10.4°
B - Segment: 1047-1066 - Tilt: 12.2°
B - Segment: 1076-1093 - Tilt: 24.8°
B - Segment: 1386-1403 - Tilt: 21.6°
B - Segment: 1409-1427 - Tilt: 24.3°
Structural assessment:
MAIDEN score = -18.4828
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]