Dengue virus capsid protein heterotetramer
Organism: Dengue virus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00869
PDB ID: 3J2P
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 8
Sequence positions:
A: 453-468|476-492
C: 453-468|474-491
B: 39-54|57-71
D: 36-54|57-71
Tilt angles:
A - Segment: 453-468 - Tilt: 10.2°
A - Segment: 476-492 - Tilt: 12.2°
C - Segment: 453-468 - Tilt: 12.2°
C - Segment: 474-491 - Tilt: 31.8°
B - Segment: 39-54 - Tilt: 29.8°
B - Segment: 57-71 - Tilt: 22.8°
D - Segment: 36-54 - Tilt: 30.9°
D - Segment: 57-71 - Tilt: 24.6°
Structural assessment:
MAIDEN score = -71.2053
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]