Dengue virus capsid protein heterotetramer
Organism: Dengue virus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00869
PDB ID: 3J2P
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.6 Å
Number of TM segments = 8
Sequence positions:
A: 454-468|475-491
C: 1021-1035|1042-1058
B: 535-549|551-565
D: 1101-1116|1118-1132
Tilt angles:
A - Segment: 454-468 - Tilt: 15.9°
A - Segment: 475-491 - Tilt: 21.9°
C - Segment: 1021-1035 - Tilt: 15.9°
C - Segment: 1042-1058 - Tilt: 22.6°
B - Segment: 535-549 - Tilt: 38.2°
B - Segment: 551-565 - Tilt: 16.5°
D - Segment: 1101-1116 - Tilt: 32.5°
D - Segment: 1118-1132 - Tilt: 16.1°
Structural assessment:
MAIDEN score = -50.3440
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]