Pseudo-atomic model of the Aquaporin-0/Calmodulin complex derived from electron microscopy
Organism: Ovis aries
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 3J41
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 24
Sequence positions:
A: 11-31|41-60|83-108|127-149|157-176|200-222
C: 10-31|41-60|83-107|127-149|157-176|200-222
B: 10-31|41-60|83-107|127-149|157-176|200-220
D: 10-31|41-60|83-107|127-149|157-176|200-220
Tilt angles:
A - Segment: 11-31 - Tilt: 23.6°
A - Segment: 41-60 - Tilt: 20.1°
A - Segment: 83-108 - Tilt: 39.9°
A - Segment: 127-149 - Tilt: 30.0°
A - Segment: 157-176 - Tilt: 23.7°
A - Segment: 200-222 - Tilt: 33.8°
C - Segment: 10-31 - Tilt: 29.7°
C - Segment: 41-60 - Tilt: 22.1°
C - Segment: 83-107 - Tilt: 44.1°
C - Segment: 127-149 - Tilt: 29.6°
C - Segment: 157-176 - Tilt: 22.3°
C - Segment: 200-222 - Tilt: 31.5°
B - Segment: 10-31 - Tilt: 29.1°
B - Segment: 41-60 - Tilt: 21.0°
B - Segment: 83-107 - Tilt: 45.3°
B - Segment: 127-149 - Tilt: 28.8°
B - Segment: 157-176 - Tilt: 22.3°
B - Segment: 200-220 - Tilt: 24.1°
D - Segment: 10-31 - Tilt: 28.4°
D - Segment: 41-60 - Tilt: 21.2°
D - Segment: 83-107 - Tilt: 43.3°
D - Segment: 127-149 - Tilt: 30.8°
D - Segment: 157-176 - Tilt: 23.8°
D - Segment: 200-220 - Tilt: 24.2°
Structural assessment:
MAIDEN score = -264.8230
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]