Pseudo-atomic model of the Aquaporin-0/Calmodulin complex derived from electron microscopy
Organism: Ovis aries
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00230
PDB ID: 3J41
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 24
Sequence positions:
A: 2-23|32-52|75-99|119-141|149-168|192-214
C: 468-489|498-518|541-565|585-606|615-634|658-677
B: 235-256|265-285|308-332|352-374|382-401|425-445
D: 701-722|731-751|774-798|818-839|848-867|891-911
Tilt angles:
A - Segment: 2-23 - Tilt: 27.2°
A - Segment: 32-52 - Tilt: 18.0°
A - Segment: 75-99 - Tilt: 43.6°
A - Segment: 119-141 - Tilt: 29.0°
A - Segment: 149-168 - Tilt: 24.0°
A - Segment: 192-214 - Tilt: 32.9°
C - Segment: 468-489 - Tilt: 26.8°
C - Segment: 498-518 - Tilt: 17.8°
C - Segment: 541-565 - Tilt: 42.4°
C - Segment: 585-606 - Tilt: 34.4°
C - Segment: 615-634 - Tilt: 24.9°
C - Segment: 658-677 - Tilt: 30.6°
B - Segment: 235-256 - Tilt: 27.6°
B - Segment: 265-285 - Tilt: 18.5°
B - Segment: 308-332 - Tilt: 42.9°
B - Segment: 352-374 - Tilt: 29.5°
B - Segment: 382-401 - Tilt: 24.1°
B - Segment: 425-445 - Tilt: 25.6°
D - Segment: 701-722 - Tilt: 26.4°
D - Segment: 731-751 - Tilt: 17.3°
D - Segment: 774-798 - Tilt: 43.1°
D - Segment: 818-839 - Tilt: 34.0°
D - Segment: 848-867 - Tilt: 24.8°
D - Segment: 891-911 - Tilt: 26.8°
Structural assessment:
MAIDEN score = -189.6051
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]