Rabbit voltage-gated calcium channel Cav1.1 complex at 4.2 Å
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00520
PDB ID: 3JBR
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.9 Å
Number of TM segments = 28
Sequence positions:
A: 53-70|86-104|117-136|163-179|196-216|311-330|441-458|474-493|504-519|526-542|559-577|636-656|811-830|840-858|873-888|894-909|928-945|1043-1061|1122-1137|1150-1169|1182-1198|1234-1250|1267-1284|1359-1379
E: 8-24|106-122|137-153|188-204
Tilt angles:
A - Segment: 53-70 - Tilt: 27.3°
A - Segment: 86-104 - Tilt: 25.1°
A - Segment: 117-136 - Tilt: 35.1°
A - Segment: 163-179 - Tilt: 35.5°
A - Segment: 196-216 - Tilt: 38.0°
A - Segment: 311-330 - Tilt: 31.5°
A - Segment: 441-458 - Tilt: 33.9°
A - Segment: 474-493 - Tilt: 30.6°
A - Segment: 504-519 - Tilt: 21.2°
A - Segment: 526-542 - Tilt: 36.5°
A - Segment: 559-577 - Tilt: 34.5°
A - Segment: 636-656 - Tilt: 47.9°
A - Segment: 811-830 - Tilt: 39.0°
A - Segment: 840-858 - Tilt: 32.5°
A - Segment: 873-888 - Tilt: 22.9°
A - Segment: 894-909 - Tilt: 25.8°
A - Segment: 928-945 - Tilt: 37.4°
A - Segment: 1043-1061 - Tilt: 41.2°
A - Segment: 1122-1137 - Tilt: 12.7°
A - Segment: 1150-1169 - Tilt: 34.1°
A - Segment: 1182-1198 - Tilt: 28.9°
A - Segment: 1234-1250 - Tilt: 30.5°
A - Segment: 1267-1284 - Tilt: 32.2°
A - Segment: 1359-1379 - Tilt: 41.0°
E - Segment: 8-24 - Tilt: 31.6°
E - Segment: 106-122 - Tilt: 12.3°
E - Segment: 137-153 - Tilt: 22.0°
E - Segment: 188-204 - Tilt: 23.8°
Structural assessment:
MAIDEN score = -241.7095
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]