Rabbit voltage-gated calcium channel Cav1.1 complex at 4.2 Å
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00520
PDB ID: 3JBR
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 28
Sequence positions:
A: 21-38|57-73|85-104|111-127|140-161|260-280|322-339|361-378|387-402|413-427|436-460|522-544|557-583|597-618|621-643|652-667|673-699|799-820|850-867|882-900|911-927|940-956|962-987|1066-1084
E: 1510-1528|1553-1570|1580-1597|1625-1642
Tilt angles:
A - Segment: 21-38 - Tilt: 30.8°
A - Segment: 57-73 - Tilt: 18.6°
A - Segment: 85-104 - Tilt: 30.8°
A - Segment: 111-127 - Tilt: 35.6°
A - Segment: 140-161 - Tilt: 46.1°
A - Segment: 260-280 - Tilt: 42.8°
A - Segment: 322-339 - Tilt: 34.5°
A - Segment: 361-378 - Tilt: 28.5°
A - Segment: 387-402 - Tilt: 15.7°
A - Segment: 413-427 - Tilt: 30.4°
A - Segment: 436-460 - Tilt: 53.8°
A - Segment: 522-544 - Tilt: 40.7°
A - Segment: 557-583 - Tilt: 50.0°
A - Segment: 597-618 - Tilt: 38.5°
A - Segment: 621-643 - Tilt: 9.0°
A - Segment: 652-667 - Tilt: 26.9°
A - Segment: 673-699 - Tilt: 50.2°
A - Segment: 799-820 - Tilt: 42.9°
A - Segment: 850-867 - Tilt: 21.9°
A - Segment: 882-900 - Tilt: 28.2°
A - Segment: 911-927 - Tilt: 26.9°
A - Segment: 940-956 - Tilt: 29.0°
A - Segment: 962-987 - Tilt: 47.3°
A - Segment: 1066-1084 - Tilt: 31.9°
E - Segment: 1510-1528 - Tilt: 17.2°
E - Segment: 1553-1570 - Tilt: 24.9°
E - Segment: 1580-1597 - Tilt: 13.6°
E - Segment: 1625-1642 - Tilt: 23.3°
Structural assessment:
MAIDEN score = -188.8877
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]