Outer membrane complex of a type IV secretion system
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03743
PDB ID: 3JQO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 86
Sequence positions:
A: 243-257|264-274|282-295|363-372
B: 175-182|269-277
E: 175-182|269-277
D: 243-257|264-272|282-295|363-372
G: 243-257|263-271|282-295|363-372
H: 175-182|269-277
K: 175-183|268-277
J: 243-257|263-271|283-295|363-372
M: 243-257|263-271|283-295|363-372
O: 36-41
N: 176-183|268-276
Q: 176-183|268-277
P: 243-257|263-271|283-295|363-372
S: 243-257|264-272|282-295|363-372
U: 36-41
T: 175-182|269-277
W: 175-182|269-277
V: 243-257|264-274|282-295|363-372
Y: 243-257|264-274|282-295|363-372
Z: 175-182|269-277
c: 175-182|269-277
b: 243-257|264-274|282-295|363-372
e: 243-257|264-274|282-295|363-372
f: 175-182|269-277
i: 175-182|269-277
h: 243-256|264-274|282-295|363-372
k: 243-256|264-274|282-295|363-372
l: 175-182|269-277
o: 175-182|269-277
n: 243-257|264-274|282-295|363-372
Tilt angles:
A - Segment: 243-257 - Tilt: 53.9°
A - Segment: 264-274 - Tilt: 53.5°
A - Segment: 282-295 - Tilt: 10.5°
A - Segment: 363-372 - Tilt: 49.3°
B - Segment: 175-182 - Tilt: 15.5°
B - Segment: 269-277 - Tilt: 19.0°
E - Segment: 175-182 - Tilt: 16.1°
E - Segment: 269-277 - Tilt: 19.5°
D - Segment: 243-257 - Tilt: 53.8°
D - Segment: 264-272 - Tilt: 44.1°
D - Segment: 282-295 - Tilt: 10.3°
D - Segment: 363-372 - Tilt: 49.6°
G - Segment: 243-257 - Tilt: 53.5°
G - Segment: 263-271 - Tilt: 34.0°
G - Segment: 282-295 - Tilt: 9.9°
G - Segment: 363-372 - Tilt: 49.5°
H - Segment: 175-182 - Tilt: 16.3°
H - Segment: 269-277 - Tilt: 19.6°
K - Segment: 175-183 - Tilt: 11.1°
K - Segment: 268-277 - Tilt: 25.2°
J - Segment: 243-257 - Tilt: 53.2°
J - Segment: 263-271 - Tilt: 33.6°
J - Segment: 283-295 - Tilt: 3.6°
J - Segment: 363-372 - Tilt: 49.4°
M - Segment: 243-257 - Tilt: 52.9°
M - Segment: 263-271 - Tilt: 33.6°
M - Segment: 283-295 - Tilt: 3.8°
M - Segment: 363-372 - Tilt: 49.1°
O - Segment: 36-41 - Tilt: 16.3°
N - Segment: 176-183 - Tilt: 13.7°
N - Segment: 268-276 - Tilt: 19.8°
Q - Segment: 176-183 - Tilt: 13.9°
Q - Segment: 268-277 - Tilt: 26.3°
P - Segment: 243-257 - Tilt: 53.1°
P - Segment: 263-271 - Tilt: 33.9°
P - Segment: 283-295 - Tilt: 3.3°
P - Segment: 363-372 - Tilt: 48.7°
S - Segment: 243-257 - Tilt: 53.5°
S - Segment: 264-272 - Tilt: 44.4°
S - Segment: 282-295 - Tilt: 9.9°
S - Segment: 363-372 - Tilt: 48.5°
U - Segment: 36-41 - Tilt: 16.7°
T - Segment: 175-182 - Tilt: 16.8°
T - Segment: 269-277 - Tilt: 21.0°
W - Segment: 175-182 - Tilt: 16.3°
W - Segment: 269-277 - Tilt: 20.3°
V - Segment: 243-257 - Tilt: 53.8°
V - Segment: 264-274 - Tilt: 53.8°
V - Segment: 282-295 - Tilt: 10.3°
V - Segment: 363-372 - Tilt: 48.6°
Y - Segment: 243-257 - Tilt: 53.9°
Y - Segment: 264-274 - Tilt: 54.0°
Y - Segment: 282-295 - Tilt: 10.3°
Y - Segment: 363-372 - Tilt: 48.6°
Z - Segment: 175-182 - Tilt: 16.2°
Z - Segment: 269-277 - Tilt: 20.3°
c - Segment: 175-182 - Tilt: 16.2°
c - Segment: 269-277 - Tilt: 20.2°
b - Segment: 243-257 - Tilt: 53.9°
b - Segment: 264-274 - Tilt: 53.9°
b - Segment: 282-295 - Tilt: 10.2°
b - Segment: 363-372 - Tilt: 48.7°
e - Segment: 243-257 - Tilt: 53.9°
e - Segment: 264-274 - Tilt: 53.9°
e - Segment: 282-295 - Tilt: 10.4°
e - Segment: 363-372 - Tilt: 48.6°
f - Segment: 175-182 - Tilt: 16.2°
f - Segment: 269-277 - Tilt: 20.0°
i - Segment: 175-182 - Tilt: 16.0°
i - Segment: 269-277 - Tilt: 19.9°
h - Segment: 243-256 - Tilt: 58.7°
h - Segment: 264-274 - Tilt: 53.9°
h - Segment: 282-295 - Tilt: 10.4°
h - Segment: 363-372 - Tilt: 48.9°
k - Segment: 243-256 - Tilt: 58.7°
k - Segment: 264-274 - Tilt: 54.0°
k - Segment: 282-295 - Tilt: 10.1°
k - Segment: 363-372 - Tilt: 48.7°
l - Segment: 175-182 - Tilt: 16.2°
l - Segment: 269-277 - Tilt: 20.2°
o - Segment: 175-182 - Tilt: 16.1°
o - Segment: 269-277 - Tilt: 20.4°
n - Segment: 243-257 - Tilt: 54.3°
n - Segment: 264-274 - Tilt: 53.9°
n - Segment: 282-295 - Tilt: 10.6°
n - Segment: 363-372 - Tilt: 49.1°
Structural assessment:
MAIDEN score = 301.5103
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]