BenF-like porin from Pseudomonas fluorescens Pf-5
Organism: Pseudomonas fluorescens
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03573
PDB ID: 3JTY
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 11
Sequence positions:
A: 2-13|38-47|51-59|93-100|102-119|131-137|142-148|178-184|189-196|206-213|220-228
Tilt angles:
A - Segment: 2-13 - Tilt: 50.6°
A - Segment: 38-47 - Tilt: 45.7°
A - Segment: 51-59 - Tilt: 47.4°
A - Segment: 93-100 - Tilt: 39.1°
A - Segment: 102-119 - Tilt: 35.4°
A - Segment: 131-137 - Tilt: 23.4°
A - Segment: 142-148 - Tilt: 26.1°
A - Segment: 178-184 - Tilt: 32.6°
A - Segment: 189-196 - Tilt: 41.2°
A - Segment: 206-213 - Tilt: 39.9°
A - Segment: 220-228 - Tilt: 44.9°
Structural assessment:
MAIDEN score = 306.5359
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]