Urea Transporter from Desulfovibrio Vulgaris
Organism: Desulfovibrio vulgaris
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF03253
PDB ID: 3K3F
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 10
Sequence positions:
A: 32-45|50-68|78-90|102-119|129-142|191-204|206-227|237-250|263-279|289-302
Tilt angles:
A - Segment: 32-45 - Tilt: 15.1°
A - Segment: 50-68 - Tilt: 44.9°
A - Segment: 78-90 - Tilt: 15.7°
A - Segment: 102-119 - Tilt: 39.5°
A - Segment: 129-142 - Tilt: 25.7°
A - Segment: 191-204 - Tilt: 15.2°
A - Segment: 206-227 - Tilt: 50.8°
A - Segment: 237-250 - Tilt: 10.6°
A - Segment: 263-279 - Tilt: 38.3°
A - Segment: 289-302 - Tilt: 22.7°
Structural assessment:
MAIDEN score = -54.8759
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]