GltPh K55C-A364C mutant crosslinked with divalent mercury
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00375
PDB ID: 3KBC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 27
Sequence positions:
A: 51-70|78-91|146-159|181-198|237-280|297-310|389-406
C: 831-845|862-881|917-930|946-975|1010-1034|1038-1052|1133-1145|1148-1162|1174-1191|1196-1210
B: 422-440|444-482|489-509|547-574|610-624|630-659|714-728|747-759|761-772|788-804
Tilt angles:
A - Segment: 51-70 - Tilt: 53.0°
A - Segment: 78-91 - Tilt: 21.4°
A - Segment: 146-159 - Tilt: 16.3°
A - Segment: 181-198 - Tilt: 50.5°
A - Segment: 237-280 - Tilt: 34.0°
A - Segment: 297-310 - Tilt: 9.9°
A - Segment: 389-406 - Tilt: 49.5°
C - Segment: 831-845 - Tilt: 28.6°
C - Segment: 862-881 - Tilt: 49.6°
C - Segment: 917-930 - Tilt: 30.2°
C - Segment: 946-975 - Tilt: 45.3°
C - Segment: 1010-1034 - Tilt: 57.7°
C - Segment: 1038-1052 - Tilt: 33.0°
C - Segment: 1133-1145 - Tilt: 16.2°
C - Segment: 1148-1162 - Tilt: 31.8°
C - Segment: 1174-1191 - Tilt: 22.4°
C - Segment: 1196-1210 - Tilt: 21.5°
B - Segment: 422-440 - Tilt: 44.6°
B - Segment: 444-482 - Tilt: 75.0°
B - Segment: 489-509 - Tilt: 57.5°
B - Segment: 547-574 - Tilt: 37.4°
B - Segment: 610-624 - Tilt: 39.2°
B - Segment: 630-659 - Tilt: 66.9°
B - Segment: 714-728 - Tilt: 30.3°
B - Segment: 747-759 - Tilt: 22.9°
B - Segment: 761-772 - Tilt: 14.5°
B - Segment: 788-804 - Tilt: 34.8°
Structural assessment:
MAIDEN score = -164.6091
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]