Sodium-potassium pump
Organism: Sus scrofa
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3KDP
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.0 Å
Number of TM segments = 12
Sequence positions:
A: 86-110|120-140|284-305|310-333|766-788|793-815|838-862|912-933|935-968|980-1002
B: 28-53
G: 28-47
Tilt angles:
A - Segment: 86-110 - Tilt: 14.1°
A - Segment: 120-140 - Tilt: 12.8°
A - Segment: 284-305 - Tilt: 29.1°
A - Segment: 310-333 - Tilt: 37.4°
A - Segment: 766-788 - Tilt: 26.9°
A - Segment: 793-815 - Tilt: 27.8°
A - Segment: 838-862 - Tilt: 14.7°
A - Segment: 912-933 - Tilt: 28.8°
A - Segment: 935-968 - Tilt: 41.6°
A - Segment: 980-1002 - Tilt: 33.3°
B - Segment: 28-53 - Tilt: 38.1°
G - Segment: 28-47 - Tilt: 11.9°
Structural assessment:
MAIDEN score = -89.2670
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]