AMPA subtype ionotropic glutamate receptor in complex with competitive antagonist ZK 200775
Organism: Rattus norvegicus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00060
PDB ID: 3KG2
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 40.0 Å
Number of TM segments = 12
Sequence positions:
A: 503-535|540-583|749-775
C: 2062-2093|2098-2141|2307-2333
B: 1283-1314|1319-1362|1528-1556
D: 2840-2872|2877-2920|3086-3112
Tilt angles:
A - Segment: 503-535 - Tilt: 35.5°
A - Segment: 540-583 - Tilt: 30.1°
A - Segment: 749-775 - Tilt: 27.7°
C - Segment: 2062-2093 - Tilt: 30.2°
C - Segment: 2098-2141 - Tilt: 27.9°
C - Segment: 2307-2333 - Tilt: 24.7°
B - Segment: 1283-1314 - Tilt: 31.6°
B - Segment: 1319-1362 - Tilt: 30.3°
B - Segment: 1528-1556 - Tilt: 31.3°
D - Segment: 2840-2872 - Tilt: 33.6°
D - Segment: 2877-2920 - Tilt: 27.2°
D - Segment: 3086-3112 - Tilt: 25.3°
Structural assessment:
MAIDEN score = -155.7942
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]