Aquaporin structure from plant pathogen Agrobacterium Tumerfaciens
Organism: Agrobacterium tumefaciens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 3LLQ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 12
Sequence positions:
A: 2-23|37-73|78-102|130-151|158-176|203-225
B: 1-23|37-73|78-102|130-151|158-176|203-225
Tilt angles:
A - Segment: 2-23 - Tilt: 29.8°
A - Segment: 37-73 - Tilt: 39.5°
A - Segment: 78-102 - Tilt: 43.4°
A - Segment: 130-151 - Tilt: 32.0°
A - Segment: 158-176 - Tilt: 21.0°
A - Segment: 203-225 - Tilt: 40.6°
B - Segment: 1-23 - Tilt: 27.6°
B - Segment: 37-73 - Tilt: 40.0°
B - Segment: 78-102 - Tilt: 44.4°
B - Segment: 130-151 - Tilt: 31.7°
B - Segment: 158-176 - Tilt: 20.6°
B - Segment: 203-225 - Tilt: 40.1°
Structural assessment:
MAIDEN score = -152.7003
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]