CBB3 cytochrome oxidase
Organism: Pseudomonas stutzeri
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00115
PDB ID: 3MK7
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 16
Sequence positions:
A: 19-37|57-75|93-111|130-146|162-177|204-220|241-255|272-287|312-329|341-359|386-402|432-449
C: 11-26|57-71
B: 11-27
U: 709-725
Tilt angles:
A - Segment: 19-37 - Tilt: 41.9°
A - Segment: 57-75 - Tilt: 27.2°
A - Segment: 93-111 - Tilt: 39.3°
A - Segment: 130-146 - Tilt: 37.7°
A - Segment: 162-177 - Tilt: 18.9°
A - Segment: 204-220 - Tilt: 9.4°
A - Segment: 241-255 - Tilt: 20.5°
A - Segment: 272-287 - Tilt: 19.5°
A - Segment: 312-329 - Tilt: 31.8°
A - Segment: 341-359 - Tilt: 32.4°
A - Segment: 386-402 - Tilt: 16.6°
A - Segment: 432-449 - Tilt: 42.7°
C - Segment: 11-26 - Tilt: 10.9°
C - Segment: 57-71 - Tilt: 20.2°
B - Segment: 11-27 - Tilt: 19.2°
U - Segment: 709-725 - Tilt: 20.5°
Structural assessment:
MAIDEN score = -102.0231
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]