Cation-bound Multidrug and Toxin Compound Extrusion (MATE) transporter
Organism: Vibrio cholerae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01554
PDB ID: 3MKT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.8 Å
Number of TM segments = 10
Sequence positions:
A: 6-44|47-71|97-119|121-148|243-265|275-299|315-339|359-382|385-410|422-445
Tilt angles:
A - Segment: 6-44 - Tilt: 50.1°
A - Segment: 47-71 - Tilt: 31.2°
A - Segment: 97-119 - Tilt: 14.7°
A - Segment: 121-148 - Tilt: 30.9°
A - Segment: 243-265 - Tilt: 5.7°
A - Segment: 275-299 - Tilt: 12.1°
A - Segment: 315-339 - Tilt: 15.6°
A - Segment: 359-382 - Tilt: 11.2°
A - Segment: 385-410 - Tilt: 12.9°
A - Segment: 422-445 - Tilt: 15.5°
Structural assessment:
MAIDEN score = -47.5041
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]