OmpF, an Outer Membrane Protein from Salmonella typhi
Organism: Salmonella enterica
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00267
PDB ID: 3NSG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.7 Å
Number of TM segments = 45
Sequence positions:
A: 12-23|33-44|53-67|73-85|88-121|123-143|148-157|172-181|183-192|211-220|222-231|254-263|266-275|293-302|304-314
C: 12-23|32-44|52-67|73-85|87-121|126-143|148-157|172-181|183-192|211-220|222-231|254-263|266-275|293-302|304-314
B: 12-23|32-44|53-67|73-85|88-121|126-143|148-157|172-181|183-192|211-220|223-231|254-262|266-275|293-302|305-314
Tilt angles:
A - Segment: 12-23 - Tilt: 46.1°
A - Segment: 33-44 - Tilt: 49.5°
A - Segment: 53-67 - Tilt: 53.8°
A - Segment: 73-85 - Tilt: 51.5°
A - Segment: 88-121 - Tilt: 45.7°
A - Segment: 123-143 - Tilt: 40.7°
A - Segment: 148-157 - Tilt: 38.5°
A - Segment: 172-181 - Tilt: 37.7°
A - Segment: 183-192 - Tilt: 35.3°
A - Segment: 211-220 - Tilt: 30.5°
A - Segment: 222-231 - Tilt: 31.0°
A - Segment: 254-263 - Tilt: 34.0°
A - Segment: 266-275 - Tilt: 30.8°
A - Segment: 293-302 - Tilt: 33.5°
A - Segment: 304-314 - Tilt: 35.0°
C - Segment: 12-23 - Tilt: 45.9°
C - Segment: 32-44 - Tilt: 48.0°
C - Segment: 52-67 - Tilt: 53.4°
C - Segment: 73-85 - Tilt: 53.1°
C - Segment: 87-121 - Tilt: 43.2°
C - Segment: 126-143 - Tilt: 28.9°
C - Segment: 148-157 - Tilt: 38.1°
C - Segment: 172-181 - Tilt: 38.0°
C - Segment: 183-192 - Tilt: 36.4°
C - Segment: 211-220 - Tilt: 30.5°
C - Segment: 222-231 - Tilt: 30.8°
C - Segment: 254-263 - Tilt: 32.6°
C - Segment: 266-275 - Tilt: 29.9°
C - Segment: 293-302 - Tilt: 31.9°
C - Segment: 304-314 - Tilt: 34.6°
B - Segment: 12-23 - Tilt: 46.5°
B - Segment: 32-44 - Tilt: 49.0°
B - Segment: 53-67 - Tilt: 54.4°
B - Segment: 73-85 - Tilt: 52.6°
B - Segment: 88-121 - Tilt: 48.1°
B - Segment: 126-143 - Tilt: 28.9°
B - Segment: 148-157 - Tilt: 36.7°
B - Segment: 172-181 - Tilt: 37.2°
B - Segment: 183-192 - Tilt: 33.7°
B - Segment: 211-220 - Tilt: 28.7°
B - Segment: 223-231 - Tilt: 29.9°
B - Segment: 254-262 - Tilt: 29.8°
B - Segment: 266-275 - Tilt: 29.5°
B - Segment: 293-302 - Tilt: 33.6°
B - Segment: 305-314 - Tilt: 40.8°
Structural assessment:
MAIDEN score = 274.8540
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]