Vibrio cholerae Cytolysin (HLYA) Heptameric Pore
Organism: Vibrio cholerae
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF12563
PDB ID: 3O44
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.0 Å
Number of TM segments = 14
Sequence positions:
A: 286-298|304-316
C: 286-298|304-316
B: 286-298|304-316
E: 286-298|304-316
D: 286-298|304-316
G: 286-298|304-316
F: 286-298|304-316
Tilt angles:
A - Segment: 286-298 - Tilt: 33.8°
A - Segment: 304-316 - Tilt: 30.7°
C - Segment: 286-298 - Tilt: 33.5°
C - Segment: 304-316 - Tilt: 30.1°
B - Segment: 286-298 - Tilt: 33.2°
B - Segment: 304-316 - Tilt: 30.0°
E - Segment: 286-298 - Tilt: 34.1°
E - Segment: 304-316 - Tilt: 30.6°
D - Segment: 286-298 - Tilt: 33.7°
D - Segment: 304-316 - Tilt: 30.4°
G - Segment: 286-298 - Tilt: 34.2°
G - Segment: 304-316 - Tilt: 31.2°
F - Segment: 286-298 - Tilt: 34.5°
F - Segment: 304-316 - Tilt: 31.1°
Structural assessment:
MAIDEN score = -126.3763
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]