Vibrio cholerae Cytolysin (HLYA) Heptameric Pore
Organism: Vibrio cholerae
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF12563
PDB ID: 3O44
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.0 Å
Number of TM segments = 14
Sequence positions:
A: 151-163|168-181
C: 1313-1325|1330-1343
B: 732-744|750-762
E: 2475-2487|2492-2505
D: 1894-1906|1911-1924
G: 3637-3649|3655-3667
F: 3056-3068|3074-3086
Tilt angles:
A - Segment: 151-163 - Tilt: 33.3°
A - Segment: 168-181 - Tilt: 30.9°
C - Segment: 1313-1325 - Tilt: 33.6°
C - Segment: 1330-1343 - Tilt: 31.7°
B - Segment: 732-744 - Tilt: 33.5°
B - Segment: 750-762 - Tilt: 31.9°
E - Segment: 2475-2487 - Tilt: 32.1°
E - Segment: 2492-2505 - Tilt: 30.4°
D - Segment: 1894-1906 - Tilt: 32.8°
D - Segment: 1911-1924 - Tilt: 31.4°
G - Segment: 3637-3649 - Tilt: 32.5°
G - Segment: 3655-3667 - Tilt: 31.0°
F - Segment: 3056-3068 - Tilt: 32.2°
F - Segment: 3074-3086 - Tilt: 30.8°
Structural assessment:
MAIDEN score = 753.3171
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]