Bovine rhodopsin with beta-ionone
Organism: Bos taurus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00001
PDB ID: 3OAX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 7
Sequence positions:
A: 46-64|71-91|111-136|153-175|202-228|248-266|294-328
Tilt angles:
A - Segment: 46-64 - Tilt: 10.6°
A - Segment: 71-91 - Tilt: 22.8°
A - Segment: 111-136 - Tilt: 39.6°
A - Segment: 153-175 - Tilt: 31.0°
A - Segment: 202-228 - Tilt: 49.5°
A - Segment: 248-266 - Tilt: 23.9°
A - Segment: 294-328 - Tilt: 39.2°
Structural assessment:
MAIDEN score = -75.9027
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]