FimD translocation domain
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00577
PDB ID: 3OHN
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 34
Sequence positions:
A: 140-148|163-172|175-183|200-207|314-322|330-339|349-356|365-372|376-383|392-400|411-419|429-438|482-490|496-505|515-524|528-537|589-598|601-609
B: 140-149|162-172|174-183|200-209|212-259|315-324|328-336|351-359|362-370|485-493|495-502|590-597|601-609|622-630|632-640|648-657
Tilt angles:
A - Segment: 140-148 - Tilt: 43.6°
A - Segment: 163-172 - Tilt: 48.3°
A - Segment: 175-183 - Tilt: 41.3°
A - Segment: 200-207 - Tilt: 30.9°
A - Segment: 314-322 - Tilt: 36.6°
A - Segment: 330-339 - Tilt: 23.6°
A - Segment: 349-356 - Tilt: 30.3°
A - Segment: 365-372 - Tilt: 31.3°
A - Segment: 376-383 - Tilt: 35.2°
A - Segment: 392-400 - Tilt: 37.8°
A - Segment: 411-419 - Tilt: 39.4°
A - Segment: 429-438 - Tilt: 43.3°
A - Segment: 482-490 - Tilt: 43.7°
A - Segment: 496-505 - Tilt: 45.0°
A - Segment: 515-524 - Tilt: 44.2°
A - Segment: 528-537 - Tilt: 45.3°
A - Segment: 589-598 - Tilt: 48.0°
A - Segment: 601-609 - Tilt: 42.4°
B - Segment: 140-149 - Tilt: 48.0°
B - Segment: 162-172 - Tilt: 47.8°
B - Segment: 174-183 - Tilt: 43.9°
B - Segment: 200-209 - Tilt: 43.6°
B - Segment: 212-259 - Tilt: 64.2°
B - Segment: 315-324 - Tilt: 44.3°
B - Segment: 328-336 - Tilt: 37.1°
B - Segment: 351-359 - Tilt: 43.1°
B - Segment: 362-370 - Tilt: 39.2°
B - Segment: 485-493 - Tilt: 42.7°
B - Segment: 495-502 - Tilt: 38.8°
B - Segment: 590-597 - Tilt: 30.1°
B - Segment: 601-609 - Tilt: 34.7°
B - Segment: 622-630 - Tilt: 36.0°
B - Segment: 632-640 - Tilt: 39.1°
B - Segment: 648-657 - Tilt: 46.0°
Structural assessment:
MAIDEN score = 182.6299
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]