FimD translocation domain
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00577
PDB ID: 3OHN
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 48
Sequence positions:
A: 4-11|24-30|39-46|53-60|99-147|158-166|177-186|193-200|211-218|220-227|238-245|256-263|272-279|307-315|323-331|341-349|355-362|374-381|386-394|400-407|415-421|434-440|445-452|459-466
B: 474-483|487-495|505-512|516-525|597-614|618-627|640-650|656-662|674-680|683-689|702-708|719-725|734-741|767-774|786-793|800-807|818-825|833-840|850-857|859-866|878-885|892-899|908-915|918-926
Tilt angles:
A - Segment: 4-11 - Tilt: 34.7°
A - Segment: 24-30 - Tilt: 39.0°
A - Segment: 39-46 - Tilt: 33.1°
A - Segment: 53-60 - Tilt: 36.4°
A - Segment: 99-147 - Tilt: 21.8°
A - Segment: 158-166 - Tilt: 38.0°
A - Segment: 177-186 - Tilt: 39.4°
A - Segment: 193-200 - Tilt: 35.7°
A - Segment: 211-218 - Tilt: 38.1°
A - Segment: 220-227 - Tilt: 43.2°
A - Segment: 238-245 - Tilt: 43.4°
A - Segment: 256-263 - Tilt: 45.5°
A - Segment: 272-279 - Tilt: 39.0°
A - Segment: 307-315 - Tilt: 42.2°
A - Segment: 323-331 - Tilt: 43.1°
A - Segment: 341-349 - Tilt: 44.0°
A - Segment: 355-362 - Tilt: 47.1°
A - Segment: 374-381 - Tilt: 46.2°
A - Segment: 386-394 - Tilt: 41.3°
A - Segment: 400-407 - Tilt: 33.9°
A - Segment: 415-421 - Tilt: 35.6°
A - Segment: 434-440 - Tilt: 35.8°
A - Segment: 445-452 - Tilt: 33.6°
A - Segment: 459-466 - Tilt: 39.5°
B - Segment: 474-483 - Tilt: 48.2°
B - Segment: 487-495 - Tilt: 47.7°
B - Segment: 505-512 - Tilt: 49.9°
B - Segment: 516-525 - Tilt: 47.6°
B - Segment: 597-614 - Tilt: 35.6°
B - Segment: 618-627 - Tilt: 46.7°
B - Segment: 640-650 - Tilt: 40.5°
B - Segment: 656-662 - Tilt: 27.8°
B - Segment: 674-680 - Tilt: 31.4°
B - Segment: 683-689 - Tilt: 32.4°
B - Segment: 702-708 - Tilt: 31.7°
B - Segment: 719-725 - Tilt: 34.0°
B - Segment: 734-741 - Tilt: 36.7°
B - Segment: 767-774 - Tilt: 32.0°
B - Segment: 786-793 - Tilt: 39.5°
B - Segment: 800-807 - Tilt: 33.7°
B - Segment: 818-825 - Tilt: 40.9°
B - Segment: 833-840 - Tilt: 41.3°
B - Segment: 850-857 - Tilt: 36.1°
B - Segment: 859-866 - Tilt: 37.6°
B - Segment: 878-885 - Tilt: 32.6°
B - Segment: 892-899 - Tilt: 40.1°
B - Segment: 908-915 - Tilt: 41.8°
B - Segment: 918-926 - Tilt: 41.7°
Structural assessment:
MAIDEN score = 1315.0996
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]