BetP-G153D with choline bound
Organism: Corynebacterium glutamicum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02028
PDB ID: 3P03
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 28
Sequence positions:
A: 4-23|35-57|89-107|121-143|177-209|217-234|242-292|300-320|339-360|374-415
C: 986-1004|1008-1037|1066-1086|1102-1122|1161-1185|1200-1219|1221-1275|1279-1302|1320-1338|1372-1397|1409-1427|1435-1454
B: 596-614|625-644|750-797|799-820|844-864|877-911
Tilt angles:
A - Segment: 4-23 - Tilt: 11.8°
A - Segment: 35-57 - Tilt: 37.9°
A - Segment: 89-107 - Tilt: 17.7°
A - Segment: 121-143 - Tilt: 37.8°
A - Segment: 177-209 - Tilt: 60.3°
A - Segment: 217-234 - Tilt: 9.1°
A - Segment: 242-292 - Tilt: 54.6°
A - Segment: 300-320 - Tilt: 21.4°
A - Segment: 339-360 - Tilt: 33.5°
A - Segment: 374-415 - Tilt: 37.0°
C - Segment: 986-1004 - Tilt: 11.7°
C - Segment: 1008-1037 - Tilt: 47.8°
C - Segment: 1066-1086 - Tilt: 22.0°
C - Segment: 1102-1122 - Tilt: 30.1°
C - Segment: 1161-1185 - Tilt: 45.6°
C - Segment: 1200-1219 - Tilt: 30.3°
C - Segment: 1221-1275 - Tilt: 59.6°
C - Segment: 1279-1302 - Tilt: 35.9°
C - Segment: 1320-1338 - Tilt: 13.6°
C - Segment: 1372-1397 - Tilt: 45.4°
C - Segment: 1409-1427 - Tilt: 25.4°
C - Segment: 1435-1454 - Tilt: 30.5°
B - Segment: 596-614 - Tilt: 21.6°
B - Segment: 625-644 - Tilt: 31.1°
B - Segment: 750-797 - Tilt: 55.6°
B - Segment: 799-820 - Tilt: 31.8°
B - Segment: 844-864 - Tilt: 24.3°
B - Segment: 877-911 - Tilt: 17.8°
Structural assessment:
MAIDEN score = -275.5365
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]