Femtosecond X-ray protein Nanocrystallography
Organism: Thermosynechococcus elongatus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00223
PDB ID: 3PCQ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 31
Sequence positions:
A: 60-80|147-166|181-202|285-302|338-358|377-397|423-445|522-542|576-595|659-678|710-729
B: 784-803|877-895|910-931|1014-1031|1074-1094|1114-1133|1161-1182|1262-1283|1319-1338|1395-1414|1444-1468
F: 1826-1847
I: 1920-1941
K: 2009-2030
J: 1953-1975
M: 2192-2213
L: 2070-2091|2107-2127|2145-2165
X: 2219-2239
Tilt angles:
A - Segment: 60-80 - Tilt: 24.9°
A - Segment: 147-166 - Tilt: 9.9°
A - Segment: 181-202 - Tilt: 21.8°
A - Segment: 285-302 - Tilt: 15.5°
A - Segment: 338-358 - Tilt: 8.5°
A - Segment: 377-397 - Tilt: 19.2°
A - Segment: 423-445 - Tilt: 27.7°
A - Segment: 522-542 - Tilt: 18.1°
A - Segment: 576-595 - Tilt: 3.2°
A - Segment: 659-678 - Tilt: 25.3°
A - Segment: 710-729 - Tilt: 11.9°
B - Segment: 784-803 - Tilt: 6.5°
B - Segment: 877-895 - Tilt: 2.2°
B - Segment: 910-931 - Tilt: 17.3°
B - Segment: 1014-1031 - Tilt: 6.1°
B - Segment: 1074-1094 - Tilt: 15.4°
B - Segment: 1114-1133 - Tilt: 10.2°
B - Segment: 1161-1182 - Tilt: 32.9°
B - Segment: 1262-1283 - Tilt: 20.1°
B - Segment: 1319-1338 - Tilt: 13.4°
B - Segment: 1395-1414 - Tilt: 21.0°
B - Segment: 1444-1468 - Tilt: 32.6°
F - Segment: 1826-1847 - Tilt: 29.8°
I - Segment: 1920-1941 - Tilt: 17.1°
K - Segment: 2009-2030 - Tilt: 29.0°
J - Segment: 1953-1975 - Tilt: 24.5°
M - Segment: 2192-2213 - Tilt: 21.5°
L - Segment: 2070-2091 - Tilt: 29.0°
L - Segment: 2107-2127 - Tilt: 19.5°
L - Segment: 2145-2165 - Tilt: 11.0°
X - Segment: 2219-2239 - Tilt: 15.0°
Structural assessment:
MAIDEN score = -176.6994
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]