Metarhodopsin II in complex with a C-terminal peptide derived from the Galpha subunit of transducin
Organism: Bos taurus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00001
PDB ID: 3PQR
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 35.0 Å
Number of TM segments = 7
Sequence positions:
A: 35-60|73-100|102-137|151-181|202-228|248-273|286-309
Tilt angles:
A - Segment: 35-60 - Tilt: 26.5°
A - Segment: 73-100 - Tilt: 35.0°
A - Segment: 102-137 - Tilt: 44.8°
A - Segment: 151-181 - Tilt: 31.7°
A - Segment: 202-228 - Tilt: 33.4°
A - Segment: 248-273 - Tilt: 20.2°
A - Segment: 286-309 - Tilt: 9.8°
Structural assessment:
MAIDEN score = -41.9377
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]