Metarhodopsin II
Organism: Bos taurus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00001
PDB ID: 3PXO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.0 Å
Number of TM segments = 7
Sequence positions:
A: 39-63|74-96|111-133|153-178|199-221|254-278|286-309
Tilt angles:
A - Segment: 39-63 - Tilt: 40.8°
A - Segment: 74-96 - Tilt: 25.2°
A - Segment: 111-133 - Tilt: 18.6°
A - Segment: 153-178 - Tilt: 13.9°
A - Segment: 199-221 - Tilt: 17.4°
A - Segment: 254-278 - Tilt: 26.4°
A - Segment: 286-309 - Tilt: 17.3°
Structural assessment:
MAIDEN score = -52.2864
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]