Beta Domain of the Bordetella Autotransporter Brka
Organism: Bordetella pertussis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03797
PDB ID: 3QQ2
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 10
Sequence positions:
A: 2-15|67-78|80-90|117-125|134-141|167-174|189-196|201-209|218-228|231-243
Tilt angles:
A - Segment: 2-15 - Tilt: 54.6°
A - Segment: 67-78 - Tilt: 48.6°
A - Segment: 80-90 - Tilt: 40.7°
A - Segment: 117-125 - Tilt: 32.2°
A - Segment: 134-141 - Tilt: 21.5°
A - Segment: 167-174 - Tilt: 17.4°
A - Segment: 189-196 - Tilt: 13.8°
A - Segment: 201-209 - Tilt: 29.0°
A - Segment: 218-228 - Tilt: 46.4°
A - Segment: 231-243 - Tilt: 50.1°
Structural assessment:
MAIDEN score = 274.8035
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]