Ail, the attachment invasion locus protein of Yersinia pestis
Organism: Yersinia pestis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF06316
PDB ID: 3QRA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.0 Å
Number of TM segments = 8
Sequence positions:
A: 30-40|52-63|67-77|96-107|110-121|140-151|155-164|171-181
Tilt angles:
A - Segment: 30-40 - Tilt: 29.5°
A - Segment: 52-63 - Tilt: 32.3°
A - Segment: 67-77 - Tilt: 31.5°
A - Segment: 96-107 - Tilt: 24.6°
A - Segment: 110-121 - Tilt: 24.5°
A - Segment: 140-151 - Tilt: 34.5°
A - Segment: 155-164 - Tilt: 30.5°
A - Segment: 171-181 - Tilt: 21.9°
Structural assessment:
MAIDEN score = -25.1014
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]