Ail, the attachment invasion locus protein of Yersinia pestis, in complex with the heparin analogue sucrose octasulfate
Organism: Yersinia pestis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF06316
PDB ID: 3QRC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 8
Sequence positions:
A: 31-42|51-61|69-76|97-103|115-120|140-146|158-165|170-180
Tilt angles:
A - Segment: 31-42 - Tilt: 57.0°
A - Segment: 51-61 - Tilt: 56.7°
A - Segment: 69-76 - Tilt: 45.8°
A - Segment: 97-103 - Tilt: 28.9°
A - Segment: 115-120 - Tilt: 6.5°
A - Segment: 140-146 - Tilt: 29.3°
A - Segment: 158-165 - Tilt: 48.7°
A - Segment: 170-180 - Tilt: 58.4°
Structural assessment:
MAIDEN score = -14.3214
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]