Ail, the attachment invasion locus protein of Yersinia pestis, in complex with the heparin analogue sucrose octasulfate
Organism: Yersinia pestis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF06316
PDB ID: 3QRC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
A: 8-14|27-33|46-55|62-79|81-99|102-122|127-137|142-149
Tilt angles:
A - Segment: 8-14 - Tilt: 21.7°
A - Segment: 27-33 - Tilt: 29.4°
A - Segment: 46-55 - Tilt: 50.7°
A - Segment: 62-79 - Tilt: 66.0°
A - Segment: 81-99 - Tilt: 69.6°
A - Segment: 102-122 - Tilt: 70.4°
A - Segment: 127-137 - Tilt: 56.3°
A - Segment: 142-149 - Tilt: 47.2°
Structural assessment:
MAIDEN score = 340.1263
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]