Bacterial oligosaccharyltransferase PglB
Organism: Campylobacter lari
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02516
PDB ID: 3RCE
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.7 Å
Number of TM segments = 9
Sequence positions:
A: 18-35|100-121|129-144|153-169|266-281|304-326|328-342|351-370|388-405
Tilt angles:
A - Segment: 18-35 - Tilt: 31.1°
A - Segment: 100-121 - Tilt: 51.5°
A - Segment: 129-144 - Tilt: 26.2°
A - Segment: 153-169 - Tilt: 36.6°
A - Segment: 266-281 - Tilt: 18.8°
A - Segment: 304-326 - Tilt: 32.1°
A - Segment: 328-342 - Tilt: 7.7°
A - Segment: 351-370 - Tilt: 42.3°
A - Segment: 388-405 - Tilt: 31.5°
Structural assessment:
MAIDEN score = -54.8085
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]