C. elegans glutamate-gated chloride channel (GLUCL) in complex with Fab and ivermectin
Organism: Caenorhabditis elegans
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 3RHW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.4 Å
Number of TM segments = 20
Sequence positions:
A: 217-239|241-260|277-299|314-336
C: 900-919|921-940|957-979|994-1015
B: 560-579|581-600|617-639|654-676
E: 1577-1598|1600-1619|1636-1657|1673-1695
D: 1239-1258|1260-1279|1296-1318|1333-1355
Tilt angles:
A - Segment: 217-239 - Tilt: 22.0°
A - Segment: 241-260 - Tilt: 9.2°
A - Segment: 277-299 - Tilt: 15.4°
A - Segment: 314-336 - Tilt: 19.6°
C - Segment: 900-919 - Tilt: 12.8°
C - Segment: 921-940 - Tilt: 8.4°
C - Segment: 957-979 - Tilt: 12.8°
C - Segment: 994-1015 - Tilt: 14.0°
B - Segment: 560-579 - Tilt: 14.6°
B - Segment: 581-600 - Tilt: 7.9°
B - Segment: 617-639 - Tilt: 14.5°
B - Segment: 654-676 - Tilt: 18.4°
E - Segment: 1577-1598 - Tilt: 20.2°
E - Segment: 1600-1619 - Tilt: 10.3°
E - Segment: 1636-1657 - Tilt: 14.7°
E - Segment: 1673-1695 - Tilt: 19.3°
D - Segment: 1239-1258 - Tilt: 12.8°
D - Segment: 1260-1279 - Tilt: 9.9°
D - Segment: 1296-1318 - Tilt: 13.3°
D - Segment: 1333-1355 - Tilt: 17.9°
Structural assessment:
MAIDEN score = -194.5203
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]