NavAb voltage-gated sodium channel (Ile217Cys, 2.7 A)
Organism: Arcobacter butzleri
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00520
PDB ID: 3RVY
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 12
Sequence positions:
A: 1017-1030|1045-1061|1076-1090|1098-1112|1133-1147|1195-1213
B: 2017-2031|2047-2061|2076-2090|2098-2112|2131-2147|2195-2213
Tilt angles:
A - Segment: 1017-1030 - Tilt: 33.7°
A - Segment: 1045-1061 - Tilt: 40.6°
A - Segment: 1076-1090 - Tilt: 26.7°
A - Segment: 1098-1112 - Tilt: 28.9°
A - Segment: 1133-1147 - Tilt: 30.3°
A - Segment: 1195-1213 - Tilt: 38.5°
B - Segment: 2017-2031 - Tilt: 25.8°
B - Segment: 2047-2061 - Tilt: 35.1°
B - Segment: 2076-2090 - Tilt: 27.2°
B - Segment: 2098-2112 - Tilt: 27.8°
B - Segment: 2131-2147 - Tilt: 35.2°
B - Segment: 2195-2213 - Tilt: 37.9°
Structural assessment:
MAIDEN score = -95.1868
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]