NavAb voltage-gated sodium channel (Ile217Cys, 2.7 A)
Organism: Arcobacter butzleri
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00520
PDB ID: 3RVY
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.8 Å
Number of TM segments = 8
Sequence positions:
A: 14-34|40-64|119-149|193-216
B: 235-255|261-283|347-372|414-437
Tilt angles:
A - Segment: 14-34 - Tilt: 21.1°
A - Segment: 40-64 - Tilt: 40.1°
A - Segment: 119-149 - Tilt: 42.5°
A - Segment: 193-216 - Tilt: 33.4°
B - Segment: 235-255 - Tilt: 17.2°
B - Segment: 261-283 - Tilt: 29.3°
B - Segment: 347-372 - Tilt: 36.1°
B - Segment: 414-437 - Tilt: 36.7°
Structural assessment:
MAIDEN score = -69.9379
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]