Ba3 cytochrome c oxidase mutant (A120F) from Thermus thermophilus in lipid environment
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00115
PDB ID: 3S8G
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.1 Å
Number of TM segments = 15
Sequence positions:
A: 19-44|68-90|104-125|143-164|185-210|223-247|267-285|290-314|347-372|374-401|416-444|465-494|528-550
C: 9-30
B: 17-38
Tilt angles:
A - Segment: 19-44 - Tilt: 40.3°
A - Segment: 68-90 - Tilt: 25.8°
A - Segment: 104-125 - Tilt: 30.0°
A - Segment: 143-164 - Tilt: 20.8°
A - Segment: 185-210 - Tilt: 31.0°
A - Segment: 223-247 - Tilt: 35.2°
A - Segment: 267-285 - Tilt: 2.6°
A - Segment: 290-314 - Tilt: 33.7°
A - Segment: 347-372 - Tilt: 39.7°
A - Segment: 374-401 - Tilt: 42.7°
A - Segment: 416-444 - Tilt: 44.4°
A - Segment: 465-494 - Tilt: 47.9°
A - Segment: 528-550 - Tilt: 5.7°
C - Segment: 9-30 - Tilt: 11.4°
B - Segment: 17-38 - Tilt: 18.0°
Structural assessment:
MAIDEN score = -165.6689
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]