Ba3 cytochrome c oxidase mutant (A120F) from Thermus thermophilus in lipid environment
Organism: Thermus thermophilus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00115
PDB ID: 3S8G
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 15
Sequence positions:
A: 11-32|62-81|96-114|136-153|180-201|215-236|261-277|282-305|339-364|371-393|408-433|461-487|523-542
C: 727-745
B: 571-590
Tilt angles:
A - Segment: 11-32 - Tilt: 39.3°
A - Segment: 62-81 - Tilt: 11.3°
A - Segment: 96-114 - Tilt: 18.1°
A - Segment: 136-153 - Tilt: 16.5°
A - Segment: 180-201 - Tilt: 28.9°
A - Segment: 215-236 - Tilt: 38.4°
A - Segment: 261-277 - Tilt: 16.6°
A - Segment: 282-305 - Tilt: 41.6°
A - Segment: 339-364 - Tilt: 46.3°
A - Segment: 371-393 - Tilt: 37.5°
A - Segment: 408-433 - Tilt: 50.1°
A - Segment: 461-487 - Tilt: 51.4°
A - Segment: 523-542 - Tilt: 18.1°
C - Segment: 727-745 - Tilt: 24.2°
B - Segment: 571-590 - Tilt: 27.8°
Structural assessment:
MAIDEN score = -135.6221
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]