Pseudomonas aeruginosa OprD
Organism: Pseudomonas aeruginosa
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF03573
PDB ID: 3SY7
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 16
Sequence positions:
A: 17-28|42-55|59-70|99-108|151-157|184-190|199-205|211-217|232-239|251-258|268-276|312-321|333-343|367-377|385-395|407-420
Tilt angles:
A - Segment: 17-28 - Tilt: 56.9°
A - Segment: 42-55 - Tilt: 59.1°
A - Segment: 59-70 - Tilt: 56.7°
A - Segment: 99-108 - Tilt: 44.7°
A - Segment: 151-157 - Tilt: 14.5°
A - Segment: 184-190 - Tilt: 15.1°
A - Segment: 199-205 - Tilt: 21.7°
A - Segment: 211-217 - Tilt: 27.0°
A - Segment: 232-239 - Tilt: 34.5°
A - Segment: 251-258 - Tilt: 34.0°
A - Segment: 268-276 - Tilt: 39.6°
A - Segment: 312-321 - Tilt: 45.4°
A - Segment: 333-343 - Tilt: 51.8°
A - Segment: 367-377 - Tilt: 53.1°
A - Segment: 385-395 - Tilt: 52.3°
A - Segment: 407-420 - Tilt: 60.2°
Structural assessment:
MAIDEN score = 18.0281
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]