Pseudomonas aeruginosa OprD
Organism: Pseudomonas aeruginosa
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03573
PDB ID: 3SY7
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 16
Sequence positions:
A: 18-29|35-49|53-68|73-84|127-132|150-156|163-169|177-183|196-202|217-223|233-239|274-281|296-303|328-336|348-357|367-378
Tilt angles:
A - Segment: 18-29 - Tilt: 61.5°
A - Segment: 35-49 - Tilt: 64.0°
A - Segment: 53-68 - Tilt: 68.0°
A - Segment: 73-84 - Tilt: 59.4°
A - Segment: 127-132 - Tilt: 25.7°
A - Segment: 150-156 - Tilt: 20.8°
A - Segment: 163-169 - Tilt: 19.7°
A - Segment: 177-183 - Tilt: 20.7°
A - Segment: 196-202 - Tilt: 24.7°
A - Segment: 217-223 - Tilt: 27.3°
A - Segment: 233-239 - Tilt: 28.6°
A - Segment: 274-281 - Tilt: 34.5°
A - Segment: 296-303 - Tilt: 42.8°
A - Segment: 328-336 - Tilt: 44.1°
A - Segment: 348-357 - Tilt: 51.3°
A - Segment: 367-378 - Tilt: 55.4°
Structural assessment:
MAIDEN score = 599.4854
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]