Pseudomonas aeruginosa OccD2 (OPDC)
Organism: Pseudomonas aeruginosa
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03573
PDB ID: 3SY9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 16
Sequence positions:
A: 9-21|25-37|44-58|68-79|122-128|141-146|155-160|168-173|188-193|208-214|224-230|261-267|283-290|316-323|337-345|357-366
Tilt angles:
A - Segment: 9-21 - Tilt: 60.5°
A - Segment: 25-37 - Tilt: 63.2°
A - Segment: 44-58 - Tilt: 69.8°
A - Segment: 68-79 - Tilt: 60.6°
A - Segment: 122-128 - Tilt: 26.4°
A - Segment: 141-146 - Tilt: 18.1°
A - Segment: 155-160 - Tilt: 17.2°
A - Segment: 168-173 - Tilt: 23.6°
A - Segment: 188-193 - Tilt: 26.5°
A - Segment: 208-214 - Tilt: 25.1°
A - Segment: 224-230 - Tilt: 25.4°
A - Segment: 261-267 - Tilt: 26.6°
A - Segment: 283-290 - Tilt: 39.6°
A - Segment: 316-323 - Tilt: 45.0°
A - Segment: 337-345 - Tilt: 48.5°
A - Segment: 357-366 - Tilt: 55.3°
Structural assessment:
MAIDEN score = 513.9564
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]