Pseudomonas aeruginosa OccD3 (OPDP)
Organism: Pseudomonas aeruginosa
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03573
PDB ID: 3SYB
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 16
Sequence positions:
A: 36-49|52-67|71-85|88-100|143-149|178-184|192-197|205-210|225-230|245-250|261-268|296-303|319-326|355-362|375-384|394-405
Tilt angles:
A - Segment: 36-49 - Tilt: 63.1°
A - Segment: 52-67 - Tilt: 64.0°
A - Segment: 71-85 - Tilt: 69.0°
A - Segment: 88-100 - Tilt: 58.9°
A - Segment: 143-149 - Tilt: 23.8°
A - Segment: 178-184 - Tilt: 20.5°
A - Segment: 192-197 - Tilt: 15.1°
A - Segment: 205-210 - Tilt: 22.4°
A - Segment: 225-230 - Tilt: 26.0°
A - Segment: 245-250 - Tilt: 23.8°
A - Segment: 261-268 - Tilt: 32.5°
A - Segment: 296-303 - Tilt: 30.6°
A - Segment: 319-326 - Tilt: 43.6°
A - Segment: 355-362 - Tilt: 46.4°
A - Segment: 375-384 - Tilt: 53.1°
A - Segment: 394-405 - Tilt: 58.8°
Structural assessment:
MAIDEN score = 565.6132
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]