Membrane protein
Organism: Thermoanaerobacter tengcongensis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00924
PDB ID: 3T9N
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 39.0 Å
Number of TM segments = 7
Sequence positions:
A: 5-39
C: 535-569
B: 271-305
E: 1064-1098
D: 798-830
G: 1592-1626
F: 1328-1362
Tilt angles:
A - Segment: 5-39 - Tilt: 42.4°
C - Segment: 535-569 - Tilt: 42.4°
B - Segment: 271-305 - Tilt: 42.5°
E - Segment: 1064-1098 - Tilt: 42.2°
D - Segment: 798-830 - Tilt: 40.7°
G - Segment: 1592-1626 - Tilt: 42.2°
F - Segment: 1328-1362 - Tilt: 42.2°
Structural assessment:
MAIDEN score = 4.2848
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]