Concentrative nucleoside transporter from Vibrio cholerae
Organism: Vibrio cholerae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF07662
PDB ID: 3TIJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 7
Sequence positions:
A: 3-20|31-49|101-132|177-192|199-217|358-375|394-415
Tilt angles:
A - Segment: 3-20 - Tilt: 29.8°
A - Segment: 31-49 - Tilt: 18.4°
A - Segment: 101-132 - Tilt: 50.5°
A - Segment: 177-192 - Tilt: 16.0°
A - Segment: 199-217 - Tilt: 27.7°
A - Segment: 358-375 - Tilt: 35.6°
A - Segment: 394-415 - Tilt: 42.6°
Structural assessment:
MAIDEN score = -80.3813
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]