Concentrative nucleoside transporter from Vibrio cholerae
Organism: Vibrio cholerae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF07662
PDB ID: 3TIJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 7
Sequence positions:
A: 26-48|100-161|170-192|197-221|229-278|345-370|378-403
Tilt angles:
A - Segment: 26-48 - Tilt: 22.3°
A - Segment: 100-161 - Tilt: 21.8°
A - Segment: 170-192 - Tilt: 20.0°
A - Segment: 197-221 - Tilt: 19.6°
A - Segment: 229-278 - Tilt: 66.2°
A - Segment: 345-370 - Tilt: 30.5°
A - Segment: 378-403 - Tilt: 35.7°
Structural assessment:
MAIDEN score = -57.2331
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]