Membrane protein
Organism: Thermoanaerobacter tengcongensis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00924
PDB ID: 3UDC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 40.0 Å
Number of TM segments = 7
Sequence positions:
A: 5-39
C: 539-573
B: 272-306
E: 1072-1107
D: 806-840
G: 1607-1641
F: 1340-1374
Tilt angles:
A - Segment: 5-39 - Tilt: 41.4°
C - Segment: 539-573 - Tilt: 41.7°
B - Segment: 272-306 - Tilt: 41.6°
E - Segment: 1072-1107 - Tilt: 41.6°
D - Segment: 806-840 - Tilt: 41.4°
G - Segment: 1607-1641 - Tilt: 41.4°
F - Segment: 1340-1374 - Tilt: 41.6°
Structural assessment:
MAIDEN score = -2.1808
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]