Closed State of Channelrhodopsin
Organism: Chlamydomonas reinhardtii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3UG9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 4
Sequence positions:
A: 87-106|155-168|257-276|281-298
Tilt angles:
A - Segment: 87-106 - Tilt: 34.5°
A - Segment: 155-168 - Tilt: 5.9°
A - Segment: 257-276 - Tilt: 25.6°
A - Segment: 281-298 - Tilt: 18.2°
Structural assessment:
MAIDEN score = -23.1882
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]