Loop deletion mutant of Salmonella typhi osmoporin (OMPC):an Outer Membrane Protein
Organism: Salmonella typhimurium
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00267
PDB ID: 3UPG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
A: 15-23|31-40|54-66|69-79|87-113|144-151|177-183|221-227|260-266|303-310
Tilt angles:
A - Segment: 15-23 - Tilt: 47.1°
A - Segment: 31-40 - Tilt: 48.9°
A - Segment: 54-66 - Tilt: 56.3°
A - Segment: 69-79 - Tilt: 55.5°
A - Segment: 87-113 - Tilt: 49.5°
A - Segment: 144-151 - Tilt: 40.9°
A - Segment: 177-183 - Tilt: 41.2°
A - Segment: 221-227 - Tilt: 36.7°
A - Segment: 260-266 - Tilt: 30.0°
A - Segment: 303-310 - Tilt: 33.9°
Structural assessment:
MAIDEN score = 48.1409
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]