Chloroplast ATP synthase c-ring from Pisum sativum
Organism: Pisum sativum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00137
PDB ID: 3V3C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 40.0 Å
Number of TM segments = 28
Sequence positions:
A: 7-32|48-76
C: 165-191|206-234
B: 86-112|127-155
E: 323-349|364-391
D: 244-270|285-312
G: 479-505|520-548
F: 402-428|443-470
I: 637-662|678-706
H: 558-584|599-627
K: 795-820|836-864
J: 716-741|757-785
M: 953-978|994-1022
L: 874-899|915-943
N: 1032-1057|1073-1101
Tilt angles:
A - Segment: 7-32 - Tilt: 6.3°
A - Segment: 48-76 - Tilt: 5.1°
C - Segment: 165-191 - Tilt: 3.2°
C - Segment: 206-234 - Tilt: 4.7°
B - Segment: 86-112 - Tilt: 3.2°
B - Segment: 127-155 - Tilt: 4.9°
E - Segment: 323-349 - Tilt: 3.8°
E - Segment: 364-391 - Tilt: 6.3°
D - Segment: 244-270 - Tilt: 3.3°
D - Segment: 285-312 - Tilt: 6.0°
G - Segment: 479-505 - Tilt: 4.3°
G - Segment: 520-548 - Tilt: 5.7°
F - Segment: 402-428 - Tilt: 4.0°
F - Segment: 443-470 - Tilt: 6.5°
I - Segment: 637-662 - Tilt: 6.9°
I - Segment: 678-706 - Tilt: 6.1°
H - Segment: 558-584 - Tilt: 4.5°
H - Segment: 599-627 - Tilt: 6.0°
K - Segment: 795-820 - Tilt: 7.0°
K - Segment: 836-864 - Tilt: 6.1°
J - Segment: 716-741 - Tilt: 6.9°
J - Segment: 757-785 - Tilt: 6.0°
M - Segment: 953-978 - Tilt: 6.8°
M - Segment: 994-1022 - Tilt: 5.7°
L - Segment: 874-899 - Tilt: 7.0°
L - Segment: 915-943 - Tilt: 5.8°
N - Segment: 1032-1057 - Tilt: 6.7°
N - Segment: 1073-1101 - Tilt: 5.4°
Structural assessment:
MAIDEN score = -256.5017
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]