Transferrin binding protein A (TBPA) from Neisseria meningitidis serogroup B in complex with the C-lobe of human transferrin
Organism: Neisseria meningitidis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00593
PDB ID: 3V89
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.3 Å
Number of TM segments = 24
Sequence positions:
A: 57-88|141-176|192-199|201-208|220-226|308-315|329-336|404-410|429-435|475-482|500-507|579-586|600-608|619-629|641-650|674-682|691-699|733-741|757-764|789-796|806-813|846-853|862-870|905-912
Tilt angles:
A - Segment: 57-88 - Tilt: 40.3°
A - Segment: 141-176 - Tilt: 11.4°
A - Segment: 192-199 - Tilt: 33.3°
A - Segment: 201-208 - Tilt: 35.1°
A - Segment: 220-226 - Tilt: 32.3°
A - Segment: 308-315 - Tilt: 31.5°
A - Segment: 329-336 - Tilt: 33.4°
A - Segment: 404-410 - Tilt: 29.3°
A - Segment: 429-435 - Tilt: 24.0°
A - Segment: 475-482 - Tilt: 21.9°
A - Segment: 500-507 - Tilt: 30.5°
A - Segment: 579-586 - Tilt: 38.8°
A - Segment: 600-608 - Tilt: 47.5°
A - Segment: 619-629 - Tilt: 52.1°
A - Segment: 641-650 - Tilt: 48.1°
A - Segment: 674-682 - Tilt: 49.3°
A - Segment: 691-699 - Tilt: 46.9°
A - Segment: 733-741 - Tilt: 42.2°
A - Segment: 757-764 - Tilt: 44.8°
A - Segment: 789-796 - Tilt: 40.8°
A - Segment: 806-813 - Tilt: 38.4°
A - Segment: 846-853 - Tilt: 41.2°
A - Segment: 862-870 - Tilt: 43.4°
A - Segment: 905-912 - Tilt: 39.4°
Structural assessment:
MAIDEN score = 97.1695
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]